David Hannasch authored 3 years ago and Jakub Jirutka committed 3 years ago

I might be missing something here and I certainly don't want to add an
unnecessary dependency if there are use-cases for using R-dev without
musl-dev, but I can't figure out how you could actually use R-dev for
anything without musl-dev installed.

The header files installed by R-dev depend on the standard library, so
that any attempt to compile using the R-dev header files will fail with e.g.

    /usr/include/R/Rinternals.h:39:11: fatal error: stdio.h: No such file or directory
       39 | # include <stdio.h>
          |           ^~~~~~~~~

fixes #8918

https://stackoverflow.com/questions/44143931/iconvlist-inconsistency-on-alpine-linux

fixes #11232

Tuan M. Hoang authored 6 years ago and Natanael Copa committed 6 years ago

community/suitesparse: upgrade to to 5.2.0

This commit updates $license variable in all APKBUILDs to comply with
short names specified by SPDX version 3.0 [1] where possible. It was
done using find-and-replace method on substrings inside $license
variables.

Only license names were updated, not "expressions" specifying relation
between the licenses (e.g. "X and Y", "X or Y", "X and (Y or Z)") or
exceptions (e.g. "X with exceptions").

Many licenses have a version or multiple variants, e.g. MPL-2.0,
BSD-2-Clause, BSD-3-Clause. However, $license in many aports do not
contain license version or variant. Since there's no way how to infer
this information just from abuild, it were left without the variant
suffix or version, i.e. non SPDX compliant.

GNU licenses (AGPL, GFDL, GPL, LGPL) are especially complicated. They
exist in two variants: -only (formerly e.g. GPL-2.0) and -or-later
(formerly e.g. GPL-2.0+). We did not systematically noted distinguish
between these variants, so GPL-2.0, GPL2, GPLv2 etc. may mean
GPL-2.0-only or GPL-2.0-or-later. Thus GNU licenses without "+" (e.g.
GPL2+) were left without the variant suffix, i.e. non SPDX compliant.

Note: This commit just fixes format of the license names, no
verification has been done if the specified license information is
actually correct!

[1]: https://spdx.org/licenses/

Mike Sullivan authored 7 years ago and Jakub Jirutka committed 7 years ago

Add -j1 option to make command to avoid segfaults on cocurrent R binary
invocations during build.

  byte-compiling package 'parallel'
  make[4]: Leaving directory '/home/buildozer/aports/community/R/src/R-3.4.3/src/library/parallel'
  make[3]: Leaving directory '/home/buildozer/aports/community/R/src/R-3.4.3/src/library/parallel'
  make[3]: Entering directory '/home/buildozer/aports/community/R/src/R-3.4.3/src/library/base'
  make[3]: Leaving directory '/home/buildozer/aports/community/R/src/R-3.4.3/src/library/base'
  installing parsed NAMESPACE files

   *** caught segfault ***
  address 0x3fffa7cb0000, cause 'memory not mapped'
  An irrecoverable exception occurred. R is aborting now ...
  Segmentation fault
  make[2]: *** [Makefile:44: R] Error 139
  make[2]: Leaving directory '/home/buildozer/aports/community/R/src/R-3.4.3/src/library'